2023

Quantitative uptake in 99mTc-EDDA/HYNIC-TOC somatostatin receptor imaging - the effect of long-acting release somatostatin analogue therapy
Gemmell AJ, Brown CM, Ray S, and Small A. Nuclear Medicine Communications.

Deep Probability Contour Framework for Tumour Segmentation and Dose Painting in PET Images
Zhang. W and Ray S. International Conference on Medical Image Computing and Computer-Assisted Intervention.
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Abstract

From coarse to fine: a deep 3D probability volume contour framework for tumor segmentation and dose painting in PET images
Zhang. W and Ray S. Frontiers In Radiology,. 3
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Abstract

The SARS-CoV-2 Alpha variant was associated with increased clinical severity of COVID-19 in Scotland: A genomics-based retrospective cohort analysis
Pascall D.J., Vink E., Blacow R., Bulteel N., Campbell A., Campbell R., Clifford S., Davis C., da Silva Filipe A., Sakka N.E., Fjodorova L., Forrest R., Goldstein E., Gunson R., Haughney J., Holden M.T.G., Honour P., Hughes J., James E., Lewis T., Lycett S., MacLean O., McHugh M., Mollett G., Onishi Y., Parcell B., Ray S., Robertson D.L., Shabaan S., Shepherd J.G., Smollett K., Templeton K., Wastnedge E., Wilkie C., Williams T., and Thomson E.C. PLoS ONE. 18 (04-Apr)
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Abstract

Directions of change in intrinsic case severity across successive SARS-CoV-2 variant waves have been inconsistent
Pascall D.J., Vink E., Blacow R., Bulteel N., Campbell A., Campbell R., Clifford S., Davis C., da Silva Filipe A., El Sakka N., Fjodorova L., Forrest R., Goldstein E., Gunson R., Haughney J., Holden M.T.G., Honour P., Hughes J., James E., Lewis T., MacLean O., McHugh M., Mollett G., Nyberg T., Onishi Y., Parcell B., Ray S., Robertson D.L., Seaman S.R., Shabaan S., Shepherd J.G., Smollett K., Templeton K., Wastnedge E., Wilkie C., Williams T., Thomson E.C., and The COVID-19 Genomics UK (COG-UK) Consortium Journal of Infection. 87 (2)
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Abstract

Geochemical evolution of dissolved trace elements in space and time in the Ramganga River, India
Sen I.S., Nizam S., Ansari A., Bowes M., Choudhary B., Glendell M., Ray S., Scott M., Miller C., Wilkie C., and Sinha R. Environmental Monitoring and Assessment. 195 (10)
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Abstract

Probabilistic Modelling of Water Quality in the Ramganga River, India, Informed by Sparce Observational Data
Glendell, Miriam; Sinha, Rajiv; Choudhary, Bharat; Singh, Manudeo; Ray, and Surajit EGU Meetings.
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Abstract

Adeno-associated virus 2 infection in children with non-A-E hepatitis
Ho and Antonia et al. Nature.
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Abstract

Beta-blockers and mechanical dyssynchrony in heart failure assessed by radionuclide ventriculography
Jones, K.A., Paterson, C.A., Ray, S., Motherwell, D.A., Hamilton, D.J., Small, A.D., Martin, W., and Goodfield, and N.E.R. Journal of Nuclear Cardiology .
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Abstract

Getting the most out of maths: How to coordinate mathematical modelling research to support a pandemic, lessons learnt from three initiatives that were part of the COVID-19 response in the UK
Dangerfield, C. E., Abrahams, I. D., Budd, C., Butchers, M., Cates, M. E., Champneys, A. R., Currie, C. S.M., Enright, J., Gog, J. R., Goriely, A., Hollingsworth, T. D., Hoyle, R. B., INI Professional Services, ., Isham, V., Jordan, J., Kaouri, M., Kavoussanakis, K., Leeks, J., Maini, P. K., Marr, C., Merritt, C., Mollison, D., Ray, S., Thompson, R. N., Wakefield, A., and Wasley, and D. Journal of Theoretical Biology.
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Abstract

2022

LUCAS: A highly accurate yet simple risk calculator that predicts survival of COVID-19 patients using rapid routine tests
Ray S., Swift A., Fanstone JW., Banerjee A., Mamalakis M., Vorselaars B., Mackenzie LS., and Weeks S. Nature Scientific Reports. 12
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Abstract

SARS-CoV-2 Omicron is an immune escape variant with an altered cell entry pathway
Willett B.J., Grove J., MacLean O.A., Wilkie C., De Lorenzo G., Furnon W., Cantoni D., Scott S., Logan N., Ashraf S., Manali M., Szemiel A., Cowton V., Vink E., Harvey W.T., Davis C., Asamaphan P., Smollett K., Tong L., Orton R., Hughes J., Holland P., Silva V., Pascall D.J., Puxty K., da Silva Filipe A., Yebra G., Shaaban S., Holden M.T.G., Pinto R.M., Gunson R., Templeton K., Murcia P.R., Patel A.H., Klenerman P., Dunachie S., Dunachie S., , R.M., Moll R.J., McCarthy S.A., Lensing S.V., Leonard S., Farr B.W., Scott C., Beaver C., Ariani C.V., Weldon D., Jackson D.K., Betteridge E., Tonkin-Hill G., Johnston I., Martincorena I., Bonfield J., Barrett J.C., Sillitoe J., Keatley J.-P., Oliver K., James K., Shirley L., Prestwood L., Foulser L., Gourtovaia M., Dorman M.J., Quail M.A., Spencer Chapman M.H., Park N.R., Livett R., Amato R., Kay S., Goodwin S., Thurston S.A.J., Rajatileka S., Gonalves S., Lo S., Sanderson T., Maclean A., Goldstein E.J., Ferguson L., Tomb R., Catalan J., Jones N., Haughney J., Robertson D.L., Palmarini M., Ray S., Thomson E.C., PITCH Consortium, and The COVID-19 Genomics UK (COG-UK) Consortium Nature Microbiology. 7 (8)
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Abstract

Radionuclide ventriculography phase analysis for risk stratification of patients undergoing cardiotoxic cancer therapy
Jones K.A., Small A.D., Ray S., Hamilton D.J., Martin W., Robinson J., Goodfield N.E.R., and Paterson C.A. Journal of Nuclear Cardiology. 29 (2)
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Abstract

Publisher Correction: SARS-CoV-2 Omicron is an immune escape variant with an altered cell entry pathway (Nature Microbiology, (2022), 7, 8, (1161-1179), 10.1038/s41564-022-01143-7)
Willett B.J., Grove J., MacLean O.A., Wilkie C., De Lorenzo G., Furnon W., Cantoni D., Scott S., Logan N., Ashraf S., Manali M., Szemiel A., Cowton V., Vink E., Harvey W.T., Davis C., Asamaphan P., Smollett K., Tong L., Orton R., Hughes J., Holland P., Silva V., Pascall D.J., Puxty K., da Silva Filipe A., Yebra G., Shaaban S., Holden M.T.G., Pinto R.M., Gunson R., Templeton K., Murcia P.R., Patel A.H., Klenerman P., Dunachie S., Dunachie S., , R.M., Moll R.J., McCarthy S.A., Lensing S.V., Leonard S., Farr B.W., Scott C., Beaver C., Ariani C.V., Weldon D., Jackson D.K., Betteridge E., Tonkin-Hill G., Johnston I., Martincorena I., Bonfield J., Barrett J.C., Sillitoe J., Keatley J.-P., Oliver K., James K., Shirley L., Prestwood L., Foulser L., Gourtovaia M., Dorman M.J., Quail M.A., Spencer Chapman M.H., Park N.R., Livett R., Amato R., Kay S., Goodwin S., Thurston S.A.J., Rajatileka S., Gonalves S., Lo S., Sanderson T., Maclean A., Goldstein E.J., Ferguson L., Tomb R., Catalan J., Jones N., Haughney J., Robertson D.L., Palmarini M., Ray S., Thomson E.C., PITCH Consortium, and The COVID-19 Genomics UK (COG-UK) Consortium Nature Microbiology. 7 (10)
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Abstract

Development of a Mortality Prediction Model in Hospitalised SARS-CoV-2 Positive Patients Based on Routine Kidney Biomarkers
Boss A.N., Banerjee A., Mamalakis M., Ray S., Swift A.J., Wilkie C., Fanstone J.W., Vorselaars B., Cole J., Weeks S., and Mackenzie L.S. International Journal of Molecular Sciences. 23 (13)
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Abstract

2021

DenResCov-19: A deep transfer learning network for robust automatic classification of COVID-19, pneumonia, and tuberculosis from X-rays
Mamalakis M., Swift A.J., Vorselaars B., Ray S., Weeks S., Ding W., Clayton R.H., Mackenzie L.S., and Banerjee A. Computerized Medical Imaging and Graphics. 94
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Abstract

2020

Use of Machine Learning and Artificial Intelligence to predict SARS-CoV-2 infection from Full Blood Counts in a population
Banerjee A., Ray S., Vorselaars B., Kitson J., Mamalakis M., Weeks S., Baker M., and Mackenzie L.S. International Immunopharmacology. 86
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Abstract

2019

Prior-based Bayesian information criterion
Bayarri M.J., Berger J.O., Jang W., Ray S., Pericchi L.R., and Visser I. Statistical Theory and Related Fields. 3 (1)
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Abstract

2018

Spatial models with covariates improve estimates of peat depth in blanket peatlands
Young D.M., Parry L.E., Lee D., and Ray S. PLoS ONE. 13 (9)
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Abstract

2017

Functional principal component analysis of spatially correlated data
Liu C., Ray S., and Hooker G. Statistics and Computing. 27 (6)
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Abstract

2014

Statistical Monitoring of Clinical Trials With Multiple Co-Primary Endpoints Using Multivariate B-value
Cheng Y., Ray S., Chang M., and Menon S. Statistics in Biopharmaceutical Research. 6 (3)
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Abstract

Kernels, degrees of freedom, and power properties of quadratic distance goodness-of-fit tests
Lindsay B.G., Markatou M., and Ray S. Journal of the American Statistical Association. 109 (505)
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Abstract

BIC and Alternative Bayesian Information Criteria in the Selection of Structural Equation Models
Bollen K.A., Harden J.J., Ray S., and Zavisca J. Structural Equation Modeling. 21 (1)
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Abstract

2013

On the number of modes of finite mixtures of elliptical distributions
Alexandrovich G., Holzmann H., and Ray S. Studies in Classification, Data Analysis, and Knowledge Organization.
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Abstract

2012

Sequence Pattern Discovery with Applications to Understanding Gene Regulation and Vaccine Design
Gupta M. and Ray S. Handbook of Statistics. 28
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Abstract

On the upper bound of the number of modes of a multivariate normal mixture
Ray S. and Ren D. Journal of Multivariate Analysis. 108
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Abstract

Functional factor analysis for periodic remote sensing data
Liu C., Ray S., Hooker G., and Friedl M. Annals of Applied Statistics. 6 (2)
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Abstract

A computational framework to emulate the human perspective in flow cytometric data analysis
Ray S. and Pyne S. PLoS ONE. 7 (5)
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Abstract

A Comparison of Bayes Factor Approximation Methods Including Two New Methods
Bollen K.A., Ray S., Zavisca J., and Harden J.J. Sociological Methods and Research. 41 (2)
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Abstract

2011

Top scoring pairs for feature selection in machine learning and applications to cancer outcome prediction
Shi P., Ray S., Zhu Q., and Kon M.A. BMC Bioinformatics. 12
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Abstract

Data Processing and Analysis for Protein Microarrays
DeLuca D.S., Marina O., Ray S., Zhang G.L., Wu C.J., and Brusic V. Methods in Molecular Biology. 723
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Abstract

2008

Quadratic distances on probabilities: A unified foundation
Lindsay B.G., Markatou M., Ray S., Yang K.E., and Chen S.-C. Annals of Statistics. 36 (2)
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Abstract

Model selection in high dimensions: A quadratic-risk-based approach
Ray S. and Lindsay B.G. Journal of the Royal Statistical Society. Series B: Statistical Methodology. 70 (1)
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Abstract

Evaluation of MHC class I peptide binding prediction servers: Applications for vaccine research
Lin H.H., Ray S., Tongchusak S., Reinherz E.L., and Brusic V. BMC Immunology. 9
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Abstract

2007

Signaling local non-credibility in an automatic segmentation pipeline
Levy J.H., Broadhurst R.E., Ray S., Chaney E.L., and Pizer S.M. Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 6512 (PART 3)
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Abstract

Amino acid biophysical properties in the statistical prediction of peptide-MHC class I binding
Ray S. and Kepler T.B. Immunome Research. 3 (1)
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Abstract

A nonparametric statistical approach to clustering via mode identification
Li J., Ray S., and Lindsay B.G. Journal of Machine Learning Research. 8
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Abstract

2005

The topography of multivariate normal mixtures
Ray S. and Lindsay B.G. Annals of Statistics. 33 (5)
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Abstract

2003

Distance-based model-selection with application to the analysis of gene expression data
Ray S. Thesis :(The Pennsylvania State University).

2002

Improved power in multinomial goodness-of-fit tests
Basu A., Ray S., Park C., and Basu S. Journal of the Royal Statistical Society Series D: The Statistician. 51 (3)
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Abstract